ProkBERT PhaStyle Model Name : neuralbioinfo/PhaStyle mini Model Type : Genomic Language Model (ProkBERT based) Model Description : ProkBERT PhaStyle is a fine tuned genomic language model designed for phage lifestyle prediction. It classifies phages as either virulent or temperate directly from nucleotide sequences. The model is based on ProkBERT architecture and was trained on the BACPHLIP dataset , excluding E. coli sequences By leveraging transfer learning, ProkBERT PhaStyle is optimized for handling fragmented sequences , commonly encountered in metagenomic and metavirome datasets. The model provides a fast, efficient alternative to traditional methods without requiring complex preprocessing pipelines or curated databases. Key Points: Trained on BACPHLIP dataset excluding E. coli sequences. Segment Length for training: 512 base pairs. Output : Binary classification (virulent or temperate). Model Parameters : ~25 million parameters. Intended Use ProkBERT PhaStyle is designed for phage lifestyle prediction tasks, suitable for: Phage Therapy : Identifying virulent phages for bacterial infection treatment. Microbiome Engineering : Understanding the interaction between temperate an…
We use cookies for essential functionality and analytics. You can accept or reject analytics cookies.Cookie policy