DeepEF Datasets Protein structure datasets used for training and evaluating DeepEF — a deep learning framework for predicting protein thermodynamic stability. Contents Path Size Description casp12 data 30/ ~110GB CASP12 structures with ProtT5 embeddings; per protein .pt tensors split into train/test/valid Processed K50 dG datasets/ ~2.2GB K50 ddG mutation datasets with AlphaFold PDB models megascale proteins.csv small Megascale protein list Data Format (casp12 data 30) Each protein is a folder under train/ , test/ , or valid / : Usage
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