LineageFlow Pfam Assets This dataset contains the preprocessed Pfam assets used by the released LineageFlow inference pipeline. Contents pfam priors asr mad/ : family specific ASR Dirichlet priors. pfam gap rates/ : family specific alignment gap statistics. pfam fastas clean/ : cleaned Pfam family alignments. pfam pi smooth tau0.5 gap060 gt80 020.csv : family sampling distribution. pfam priors keep ids gap060 gt80 020.txt : family keep list used by the default sampler. Usage The inference scripts expect these assets under dataset/ by default. All paths can be overridden from the command line. Notes These files are preprocessed from Pfam family alignments. Please follow the license and usage terms of the original Pfam resource when using the data.
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